* Corresponding author

53. Jacomin AC and Nezis I.P. * (2018). Assays to monitor aggrephagy in Drosophila brain. Methods Mol Biol In press

52. Tusco R,  Jacomin AC,  Jain A, Penman BS , Larsen KB ,  Johansen T and  Nezis I.P.* (2017) Kenny mediates selective autophagic degradation of the IKK complex to control innate immune responses. Nature Communications 8:1264

doi:10.1038/s41467-017-01287-9

51. Jacomin AC, Samavedam S, Charles H and Nezis I.P.* (2017) iLIR@viral : a web resource for LIR motif-containing proteins in viruses. Autophagy 13:1782-1789.

50. Tsapras P and Nezis I.P.* (2017) Caspase involvement in autophagy. Cell Death & Differ. 24:1369-1379.

49. Jacomin AC, Samavedam S, Promponas V and Nezis I.P.* (2016) iLIR database: a web resource for LIR-containing proteins in eukaryotes. Autophagy 12:1945-1953.

48. Palara A, Sagona AP and Nezis I.P.* (2016) Preparation of Drosophila follicles for transmission electron microscopy. Methods Mol Biol 1457: 105-110.

47. Tsapras P, Sagona AP and Nezis I.P.* (2016) Immuno-gold labeling of Drosophila follicles for transmission electron microscopy. Methods Mol Biol 1457: 97-103.

46. Jacomin AC and Nezis I.P. * (2016). Using fluorescent reporters to monitor autophagy in the female germ line cells in Drosophila melanogaster. Methods Mol Biol 1457:69-78.

45. Klionsky D.J., ……Nezis I.P. ……et al., (2016) Guidelines for the use and interpretation of assays for monitoring autophagy (3d edition). Autophagy 12:1-222.

44. Eikenes AH, Malerød L, Christensen AL, Steen CB, Mathieu J, Nezis I.P., Liestøl K, Huynh JR, Stenmark H, Haglund K (2015) ALIX and ESCRT-III Coordinately Control Cytokinetic Abscission during Germline Stem Cell Division In Vivo. PLoS Genet 11(1): e1004904. doi:10.1371/journal.pgen.1004904.

43. Nezis IP*, Vaccaro MI, Devenish RJ, Juhasz G (2014). Autophagy in development, cell differentiation and homeodynamics: from molecular mechanisms to diseases and pathophysiology. BioMed Research International, doi:10.1155/2014/273473.

42. Mulakkal NC, Nagy P, Takats S, Tusco R, Juhasz G* and Nezis I.P. * (2014) Autophagy in Drosophila: from historical studies to current knowledge. BioMed Research International, doi:10.1155/2014/273473.

41. Sagona AP, Nezis I.P., Stenmark H (2014) Association of CHMP4B and autophagy with micronuclei: implications for cataract formation. BioMed Research International, doi:10.1155/2014/974393.

40. Kalvari I, Tsompanis S, Mulakkal NC, Osgood R, Johansen T, Nezis I.P. *, Promponas VJ* (2014) iLIR: a web resource for prediction of Atg8 family interacting proteins. Autophagy 10 (5) 913-925.

39. Schultz SW, Brech A and Nezis IP* (2013). Time flies: Autophagy during ageing in Drosophila. InTech – open science, 487- 511, Editor: Yannick Bailly (978-953-51-1062-0).

38. Nezis I.P* (2012). The selectivity and specificity of autophagy in Drosophila. Cells 1(3): 248-262.

37. Klionsky D.J., Abdalla F.C., Abeliovich H., ……Nezis I.P. ……et al., (2012). Guidelines for the use and interpretation of assays for monitoring autophagy. Autophagy 8 (4) 445-544.

36. Nezis I.P.* (2012). Selective autophagy in Drosophila. Int J Cell Biol 2012: 146767.

35. Nezis I.P.* and Stenmark H*. (2012). p62 at the interphase of autophagy, oxidative stress signaling and cancer. Antioxid Redox & Signal 17(5): 786-793.

34. Bartlett BJ, Isakson P, Lewerenz J, Sanchez H, Cumming R, Harris G, Nezis I.P., Schubert D, Simonsen A, and Finley K.D. (2011). p62, Ref(2)P and ubiquitinated proteins are conserved markers of neuronal aging, aggregate formation and progressive autophagic defects. Autophagy 6:572-583 (cover story).

33. Haglund K, Nezis I.P. and Stenmark H. (2011). Structure and functions of stable intercellular bridges formed by incomplete cytokinesis during development. Commun Integr Biol 4:1-9.

32. Sagona A.P., Nezis I.P., Bache K.G., Haglund K., Bakken A.C., Skotheim RI., Stenmark H. (2011). A tumor-associated mutation of FYVE-CENT prevents its interaction with Beclin 1 and interferes with cytokinesis. PLoS ONE Mar 24;6(3):e17086

31. Nezis I.P*., Shravage B, Sagona A.P., Johansen T, Baehrecke EH and Stenmark* H. (2010). Autophagy as a trigger for cell death: Autophagic degradation of inhibitor of apoptosis dBruce controls DNA fragmentation during Drosophila late oogenesis. Autophagy 6:1214-1215.

30. Nezis I.P., Sagona A.P., Schink KO, Stenmark H. (2010). Divide and ProsPer: The emerging role of PtdIns(3)P in cytokinesis. Trends Cell Biol 20:642-649.

29. Nezis I.P*., Shravage B, Sagona A.P., Lamark T, Bjørkøy G, Johansen T, Rusten TE, Brech A, Baehrecke EH and Stenmark H*. (2010). Autophagic degradation of inhibitor of apoptosis dBruce controls DNA fragmentation during Drosophila late oogenesis. J Cell Biol. 190:523-531.

28. Shimokawa N, Haglund K, Hölter SM, Grabbe C, Kirkin V, Koibuchi N, Schultz C, Rozman J, Hoeller D, Qiu CH, Londoño MB, Ikezawa J, Jedlicka P, Stein B, Schwarzacher SW, Wolfer DP, Ehrhardt N, Heuchel R, Nezis I.P, Brech A, Schmidt MH, Fuchs H, Gailus-Durner V, Klingenspor M, Bogler O, Wurst W, Deller T, de Angelis MH, Dikic I. (2010). CIN85 regulates dopamine receptor endocytosis and governs behaviour in mice. EMBO J 29: 2421-2432.

27. Malagoli D,. Abdalla FC, Cao Y, Feng Q, Fujisaki K, Gregorc A, Matsuo T,. Nezis I.P., Papassideri I, Sass M, Silva-Zacarin EM., Tettamanti G, Umemiya-Shirafuji R (2010). Autophagy and its physiological relevance in arthropods: current knowledge and perspectives. Autophagy 6:575-588.

26. Haglund, K., Nezis I.P., Lemus, D., Grabbe, C., Wesche J, Liestol K., Dikic, I., Palmer, R., Stenmark, H. (2010). Cindr interacts with anillin to control cytokinesis in Drosophila melanogaster. Curr Biol 20:944-950.

25. Sagona AP, Nezis I.P., Pedersen NM, Liestol K., Poulton J, Rusten TE, Skotheim RB, Raiborg C and Stenmark H. (2010). PtdIns(3)P controls cytokinesis through KIF13A-mediated recruitment of FYVE-CENT to the midbody. Nature Cell Biol 12:362-371 (Full Article).
Comment in: 1) Nature Cell Biology News and Views: Montagnac, G and Chavrier, P. (2010).Abscission accomplished by PtdIns(3)P. Nat Cell Biol 12:308-310.
2) Leah, E. (2010). Cytokinesis: Where PIP splits, fatty acid stops. Nature Lipidomics Gateway. doi:10.1038/lipidmaps.2010.13.

24. Vaccari T, Rusten T.E., Menut L., Nezis I.P., Brech A., Stenmark H. and Bilder D. (2009). Comparative analysis of ESCRT-I, -II, -III function in Drosophila by efficient isolation of ESCRT mutants. J Cell Sci 122:2413-2423.

23. Nezis I.P., Lamark T., Velentzas A.D., Rusten T.E., Bjorkoy G., Johansen T., Papassideri I., Stravopodis D., Margaritis L.H., Stenmark, H. and Brech A. (2009). Cell death during Drosophila early oogenesis is mediated through autophagy. Autophagy 5:298-302.

22. Nezis I.P. * and Papassideri I.S*. (2008). Monitoring autophagy in insect eggs. Methods Enzymol 451:669-683.

21. Nezis I.P., Simonsen, A., Sagona A.P., Finley, K., Gaumer, S., Contamine, D., Rusten T.E., Stenmark, H. and Brech A. (2008). Ref(2)P, the Drosophila melanogaster homologue of mammalian p62, is required for the formation of protein aggregates in adult brain. J. Cell Biol. 180:1065-1071.

20. Mpakou V.E., Nezis I.P., Stravopodis D.J., Margaritis L.H. and Papassideri I.S. (2008). Different modes of programmed cell death during oogenesis of the silkmoth Bombyx mori. Autophagy 4:97-100.

19. Rusten TE., Vaccari T., Lindmo K., Rodahl L.M.W., Nezis I.P., Sem-Jacobsen C., Wendler F., Vincent JP., Brech A., Bilder D. and Stenmark H. (2007). ESCRTs and Fab1 regulate distinct steps of autophagy. Curr Biol 17:1817-1825.
Comment in: Cell’s Leading Edge ‘Autophagy finds an ESCRT’ Cell 131:1211.

18. Hatziantoniou S., Nezis I.P., Margaritis L.H and Demetzos C. (2007). Visualisation of liposomes prepared from skin and stratum corneum lipids by transmission electron microscopy. Micron 38: 777-781.

17. Velentzas A.D., Nezis I.P., Stravopodis D.J., Papassideri I.S. and Margaritis L.H. (2007). Apoptosis and autophagy function cooperatively for the efficacious execution of programmed nurse cell death during Drosophila virilis oogenesis. Autophagy 3: 130-132.

16. Velentzas A.D., Nezis I.P., Stravopodis D.J., Papassideri I.S and Margaritis L.H. (2007). Mechanisms of programmed cell death during oogenesis in Drosophila virilis. Cell Tissue Research 327: 399-414.

15. Panagopoulos D.J., Chavdoula E.D., Nezis I.P. and Margaritis L.H. (2007). Cell death induced by GSM 900MHz and DCS 1800MHz mobile telephony radiation. Mutat Res 626: 69-78.

14. Velentzas A.D., Nezis I.P., Stravopodis D.J., Papassideri, I.S. and Margaritis L.H. (2007). Stage-specific regulation of programmed cell death during oogenesis of the medfly Ceratitis capitata (Diptera, Tephritidae). Int J Dev Biol 51: 57-66.

13. Mpakou V.E., Nezis I.P., Stravopodis D.J., Margaritis L.H. and Papassideri I.S. (2006). Programmed cell death of the ovarian nurse cells during oogenesis of the silkmoth Bombyx mori. Dev Growth Differ 48: 419-428.

12. Nezis I.P., Stravopodis D.J., Margaritis L.H. and Papassideri I.S. (2006). Autophagy is required for the degeneration of the ovarian follicular epithelium in higher Diptera. Autophagy 2: 297-298.

11. Nezis I.P., Stravopodis D.J., Margaritis L.H. and Papassideri I.S. (2006). Chromatin condensation of ovarian nurse and follicle cells is regulated independently from DNA fragmentation during Drosophila late oogenesis. Differentiation 74: 293-304 (cover story).

10. Nezis I.P., Stravopodis D.J., Margaritis L.H. and Papassideri I.S. (2006). Programmed cell death of follicular epithelium during the late developmental stages of oogenesis in the fruit flies Bactrocera oleae and Ceratitis capitata (Tephritidae) is mediated by autophagy. Dev Growth Differ 48: 189-198.

9. Nezis I.P., Stravopodis D.J., Margaritis L.H. and Papassideri I.S. (2006). Follicular atresia during Dacus oleae oogenesis. J Insect Physiol 52: 282-290.

8. Chondrogianni N., Tzavelas C., Pemberton A.J., Nezis I.P., Rivett A.J., Gonos E.S. (2005). Overexpression of proteasome beta 5 subunit increases amount of assembled proteasome and confers ameliorated response to oxidative stress and higher survival rates. J Biol Chem 280: 11840-11850.

7. Nezis I.P., Stravopodis D.J., Papassideri I.S., Stergiopoulos C. and Margaritis L.H. (2005). Morphological irregularities and features of resistance to apoptosis in the dcp-1/pita double mutated egg chambers during Drosophila oogenesis. Cell Motil Cytoskeleton 60: 14-23.

6. Nezis I.P., Modes V, Mpakou V, Stravopodis D.J., Papassideri I.S., Mammali I. and Margaritis L.H. (2003). Modes of programmed cell death during Ceratitis capitata oogenesis. Tissue & Cell 35: 113-119.

5. Sideratou Z., Foundis J, Tsiourvas D, Nezis I.P., Papadimas G. and Paleos C.M. (2002). A novel dendrimeric “glue” for adhesion of phosphatidyl choline based liposomes. Langmuir 18: 5036-5039.

4. Nezis I.P., Stravopodis D.J., Papassideri I.S., Robert-Nicoud M. and Margaritis L.H. (2002). Dynamics of apoptosis in the ovarian follicle cells during the late stages of Drosophila oogenesis. Cell Tissue Research 307: 401-409.

3. Nezis I.P., Stravopodis D.J., Papassideri I.S. and Margaritis L.H. (2001). Actin cytoskeleton reorganization of the apoptotic nurse cells during the late developmental stages of oogenesis in Dacus oleae. Cell Motil Cytoskeleton 48: 224-233.

2. Nezis I.P., Stravopodis D.J., Papassideri I.S., Robert-Nicoud M. and Margaritis L.H. (2000). Stage-specific apoptotic patterns during Drosophila oogenesis. Eur J Cell Biol 79: 610-20.

1. Xanthou G., Tapinos N., Polichronis M., Nezis I.P., Margaritis L.H., Moutsopoulos H.M. (1999). CD4 cytotoxic and dendritic cells in the immunopathologic lesion of Sjogren’s Syndrome. Clin Exp Immunol 118: 154-63.

Miscellaneous publications
1. Autophagy researchers.
Eskelinen EV, Liton PB, Nezis IP, Piacentini M. Autophagy 2013 Oct 1

Google Scholar:
https://scholar.google.co.uk/citations?user=oVUMiaQAAAAJ&hl=en

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